Decoding of stimulus velocity using a model of ganglion cell populations in primate retina

E Lalor, Y Ahmadian, L Paninski and E Simoncelli.

Published in Computational and Systems Neuroscience (CoSyNe), (I-63), Feb 2009.

DOI: 10.3389/conf.neuro.06.2009.03.022

  • Official (pdf)

  • The encoding of visual stimuli in the spike trains of retinal ganglion cells (RGCs) places limitations on subsequent visual processing. Here, we examine such limitations in the context of visual motion estimation. We describe the encoding of visual stimuli in spike trains using a recently developed statistical model for RGC populations (Pillow et al., Nature 454(7206): 995--999, 2008). The model includes spike-history effects and cross-coupling between cells of the same kind and of different kinds and, accurately captures the stimulus dependence and spatio-temporal correlation structure of population responses. It also provides a relatively tractable expression for the probability of observing a given spike train, conditioned on the stimulus.

    Based on this model-based likelihood function, we construct an optimal (Bayesian) estimator for image velocity given the population spike train response. We implement two variants of this decoder. In the first, we assume the visual input is formed by translation of a known spatial intensity image. In the second, we assume only the (naturalistic) correlation structure of the intensity image is known, but do not know the image explicitly. Finally we explore a biologically-plausible ``motion energy'' method for decoding the velocity and show that, as with estimators based on spatio-temporal gradients, there is a close mathematical connection between this energy method and the optimal Bayesian decoder in the case that the image is not known.

    Through simulations, we show that the performance of the Bayesian decoder is less accurate with decreasing prior image information. Simulations across several different speeds and contrasts of a moving bar stimulus reveal that the Bayesian decoder with full image information achieves an average speed estimation precision of 2.7%, while the motion energy method results in an average speed estimation precision of only 7.8% across the same set of conditions. For both methods, estimation precision is shown to be better for more slowly moving stimuli and for stimuli with higher contrast. Human psychophysical performance on short duration velocity estimation tasks seems to be much better represented by the performance of the model in the case that the image is not known exactly a priori. Finally, we show that estimation performance is shown to be rather insensitive to the details of the precise receptive field location, correlated activity between cells, and spike timing.


  • Listing of all publications