Liam Paninski

Some recent results on the neural coding problem

A central problem in neuroscience is to estimate the conditional probabilities P(response | stimulus) from neurophysiological data. Stated in this generality, this problem is unsolvable; we will never be able to record enough responses to specify these distributions for all possible stimuli. (This theme is not restricted to the neural context, of course.) Thus, we have to try to solve some kind of easier version of this problem. As time permits, I'd like to talk about some recent and ongoing work on three such approaches:

1) Instead of trying to estimate the full distribution, just estimate a few of the most important functionals of the distribution. In particular, I will discuss the problem of estimating certain information-theoretic quantities from data.

2) Fit some low-dimensional model to the distributions, instead of trying to estimate them by "brute force" (nonparametrically). Models of ``cascade'' form --- with a simple linear prefiltering stage followed by a stochastic, nonlinear spiking step --- have turned out to be especially interesting and useful. I'll focus on applications to the analysis of population coding of complex hand movements in primary motor cortex.

3) Design the experiment to be as efficient as possible, so we don't waste our time recording the responses to "uninformative" stimuli. This leads naturally to a simple Bayesian adaptive experimental-design procedure (for which, in turn, we can prove some interesting convergence theorems).